Art 0.1.0

Built from art-dev 78fb10b.

data/examples/config.yaml

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+# Example user/config.yaml. Copy to user/config.yaml and edit; anything here
+# overrides the code repository's config.yaml (nested keys override, lists
+# replace).
+
+contact:
+  email: you@example.edu      # sent to arXiv and Crossref (polite pool)
+
+arxiv:
+  categories:                 # rss.arxiv.org category names
+    - cond-mat.soft
+    - physics.flu-dyn
+
+screen:
+  thresholds:                 # re-ranker score for a highlight, per profile id
+    default: 0.2
+    # suspension-rheology: 0.3
+  calibrated: null

data/examples/interest_profile.md

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+# Research Interest Profile (example)
+
+Replace this file with your own: copy it to user/interest_profile.md. It is a
+prose version of your interests, read only by the LLM-as-classifier baseline
+(art/baselines/llm_score.py); the screen itself uses user/profiles.yaml.
+
+## Research focus
+
+The structure, dynamics, and rheology of soft matter, with emphasis on
+concentrated suspensions and the microscopic origins of bulk rheological
+behavior.
+
+## Priority topics
+
+- **Suspension rheology**: viscosity, shear thickening and thinning, normal
+  stresses, and viscoelasticity of concentrated suspensions
+- **Microrheology**: passive and active probe techniques and their connection
+  to bulk rheology
+
+## Not of primary interest
+
+- Polymer processing (extrusion, injection molding)
+- Computational fluid dynamics without rheological content

data/examples/profiles.yaml

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+# Example interest profiles for bingham. Copy to user/profiles.yaml and edit,
+# or draft one from your own papers with `bingham init` (see README).
+#
+# Each profile:
+#   description  2-3 sentences in the field's vocabulary; the query for
+#                embedding and re-ranking
+#   keywords     technical terms and abbreviations for BM25 (see data/vocabulary.md)
+#   exemplars    papers that typify the topic, as `doi:` or `arxiv:`. A paper's
+#                embedding score is its maximum similarity over the description
+#                and the exemplars. Abstracts are fetched once; paste one under
+#                `abstract:` if no source has it.
+#
+# A profile's version is a hash of its content, so editing a profile re-screens
+# against that profile only.
+
+# Papers with a tracked author always reach the re-ranker and the digest.
+# Match on full names; initials are ambiguous across arXiv.
+tracked_authors: []
+  # - name: Jane Q. Researcher
+  #   match: [Jane Q. Researcher, Jane Researcher]
+
+profiles:
+  - id: suspension-rheology
+    name: Suspension rheology
+    description: >
+      Rheology of suspensions of solid particles in Newtonian and viscoelastic
+      liquids: viscosity as a function of volume fraction, shear thinning and
+      shear thickening, normal stress differences, yield stress, and
+      viscoelasticity of concentrated hard-sphere, charged, attractive, and
+      non-Brownian suspensions.
+    keywords: [suspension, non-Brownian, volume fraction, jamming, Peclet number,
+      hydrodynamic interactions, lubrication force, Stokesian dynamics,
+      normal stress difference, shear thickening, DST, yield stress, SAOS, LAOS]
+    exemplars:
+      - doi: 10.1146/annurev-chembioeng-060713-040221   # Denn & Morris 2014, review
+
+  - id: microrheology
+    name: Microrheology
+    description: >
+      Passive and active microrheology of soft materials: tracer particle
+      tracking and the mean squared displacement, the generalized
+      Stokes-Einstein relation, one- and two-point microrheology, optical and
+      magnetic tweezers, and diffusing wave spectroscopy.
+    keywords: [microrheology, mean squared displacement, MSD, GSER,
+      two-point microrheology, particle tracking, optical tweezers,
+      magnetic tweezers, DWS]
+    exemplars: []